Version 5.4
Homo sapiens Gene: SNAP47
Summary
InnateDB Gene IDBG-107100.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SNAP47
Gene Name synaptosomal-associated protein, 47kDa
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000143740
Encoded Proteins
IDBP-107104
synaptosomal-associated protein, 47kDa
IDBP-107106
synaptosomal-associated protein, 47kDa
IDBP-107108
synaptosomal-associated protein, 47kDa
IDBP-390097
synaptosomal-associated protein, 47kDa
IDBP-390098
synaptosomal-associated protein, 47kDa
IDBP-811084
synaptosomal-associated protein, 47kDa
IDBP-811080
synaptosomal-associated protein, 47kDa
IDBP-811082
synaptosomal-associated protein, 47kDa
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:227728539-227781231
Strand Forward strand
Band q42.13
Transcripts
ENST00000366760 ENSP00000355722
ENST00000366759 ENSP00000355721
ENST00000315781 ENSP00000314157
ENST00000418653 ENSP00000402730
ENST00000426344 ENSP00000411128
ENST00000480897
ENST00000480265
ENST00000475930
ENST00000491439
ENST00000470038
ENST00000478768 ENSP00000485027
ENST00000617596 ENSP00000483253
ENST00000606873 ENSP00000475207
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0060291 long-term synaptic potentiation
Cellular Component
GO:0012505 endomembrane system
GO:0016020 membrane
GO:0030425 dendrite
GO:0031083 BLOC-1 complex
GO:0043025 neuronal cell body
GO:0048471 perinuclear region of cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000009894
View Gene Order
ENSBTAG00000004188
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.325081 Hs.624960
RefSeq NM_053052 XM_005273043 XM_005273044 XM_006711734
HUGO
OMIM
CCDS CCDS1562
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca