Version 5.4
Mus musculus Gene: Snap47
Summary
InnateDB Gene IDBG-178630.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Snap47
Gene Name synaptosomal-associated protein, 47
Synonyms 1110031B06Rik; SNAP-47
Species Mus musculus
Ensembl Gene ENSMUSG00000009894
Encoded Proteins
IDBP-178632
synaptosomal-associated protein, 47
IDBP-400465
synaptosomal-associated protein, 47
IDBP-541102
synaptosomal-associated protein, 47
IDBP-542796
synaptosomal-associated protein, 47
IDBP-542514
synaptosomal-associated protein, 47
IDBP-535025
synaptosomal-associated protein, 47
IDBP-541167
synaptosomal-associated protein, 47
IDBP-542792
synaptosomal-associated protein, 47
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000143740:
Gene Information
Type Protein coding
Genomic Location Chromosome 11:59407134-59451186
Strand Reverse strand
Band B1.3
Transcripts
ENSMUST00000010038 ENSMUSP00000010038
ENSMUST00000120940 ENSMUSP00000113555
ENSMUST00000156146 ENSMUSP00000121880
ENSMUST00000136436 ENSMUSP00000115762
ENSMUST00000132969 ENSMUSP00000116170
ENSMUST00000145550 ENSMUSP00000114816
ENSMUST00000150297 ENSMUSP00000122508
ENSMUST00000125846 ENSMUSP00000119433
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0060291 long-term synaptic potentiation
Cellular Component
GO:0012505 endomembrane system
GO:0016020 membrane
GO:0030425 dendrite
GO:0031083 BLOC-1 complex
GO:0043025 neuronal cell body
GO:0048471 perinuclear region of cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000143740
View Gene Order
ENSBTAG00000004188
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene 67826
UniGene Mm.407154 Mm.488713
RefSeq NM_144521 XM_006534021 XM_006534022 XM_006534023 XM_006534024 XM_006534025
OMIM
CCDS CCDS24767
HPRD
IMGT
MGI ID MGI:1915076
MGI Symbol Snap47
EMBL
GenPept
RNA Seq Atlas 67826

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca