Version 5.4
Homo sapiens Gene: DPF3
Summary
InnateDB Gene IDBG-11119.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol DPF3
Gene Name D4, zinc and double PHD fingers, family 3
Synonyms BAF45C; CERD4
Species Homo sapiens
Ensembl Gene ENSG00000205683
Encoded Proteins
IDBP-11121
D4, zinc and double PHD fingers, family 3
IDBP-232124
D4, zinc and double PHD fingers, family 3
IDBP-583708
D4, zinc and double PHD fingers, family 3
IDBP-599000
D4, zinc and double PHD fingers, family 3
IDBP-586979
D4, zinc and double PHD fingers, family 3
IDBP-808745
D4, zinc and double PHD fingers, family 3
IDBP-808746
D4, zinc and double PHD fingers, family 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a member of the D4 protein family. The encoded protein is a transcription regulator that binds acetylated histones and is a component of the BAF chromatin remodeling complex. Alternate splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2013]
Gene Information
Type Protein coding
Genomic Location Chromosome 14:72619296-72894116
Strand Reverse strand
Band q24.2
Transcripts
ENST00000381216 ENSP00000370614
ENST00000366353 ENSP00000381791
ENST00000556509 ENSP00000450518
ENST00000557704
ENST00000546183 ENSP00000444662
ENST00000556891
ENST00000556997
ENST00000556238
ENST00000554594
ENST00000555781
ENST00000553608
ENST00000556902
ENST00000555469
ENST00000541685 ENSP00000441640
ENST00000610283 ENSP00000479526
ENST00000614862 ENSP00000481992
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 16 experimentally validated interaction(s) in this database.
Experimentally validated
Total 16 [view]
Protein-Protein 14 [view]
Protein-DNA 2 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0007399 nervous system development
GO:0008150 biological_process
GO:0016568 chromatin modification
Cellular Component
GO:0071565 nBAF complex
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.162868 Hs.739794
RefSeq NM_001280542 NM_001280543 NM_001280544 NM_012074 XM_005268109
HUGO
OMIM
CCDS CCDS45133 CCDS61495 CCDS61496 CCDS61497
HPRD 03395
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca