Version 5.4
Homo sapiens Gene: LCORL
Summary
InnateDB Gene IDBG-11193.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LCORL
Gene Name ligand dependent nuclear receptor corepressor-like
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000178177
Encoded Proteins
IDBP-11195
ligand dependent nuclear receptor corepressor-like
IDBP-11197
ligand dependent nuclear receptor corepressor-like
IDBP-11199
ligand dependent nuclear receptor corepressor-like
IDBP-481196
ligand dependent nuclear receptor corepressor-like
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a transcription factor that appears to function in spermatogenesis. Polymorphisms in this gene are associated with measures of skeletal frame size and adult height. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 4:17841199-18021876
Strand Reverse strand
Band p15.31
Transcripts
ENST00000382226 ENSP00000371661
ENST00000326877 ENSP00000317566
ENST00000382224 ENSP00000371659
ENST00000510451 ENSP00000423489
ENST00000510121
ENST00000512376
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
Biological Process
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0006366 transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000015882
View Gene Order
ENSBTAG00000046561
Not yet available
Cross-References
SwissProt Q8N3X6
TrEMBL C9JI46 D6RA10
UniProt Splice Variant
Entrez Gene 254251
UniGene Hs.446201 Hs.608423
RefSeq NM_001166139 NM_153686
HUGO HGNC:30776
OMIM 611799
CCDS CCDS3425 CCDS54749
HPRD
IMGT
EMBL AC005768 AC079399 AK055258 BC037322 CH471069
GenPept AAH37322 BAB70892 EAW92786 EAW92787
RNA Seq Atlas 254251

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca