Version 5.4
Mus musculus Gene: Clec16a
Summary
InnateDB Gene IDBG-132522.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Clec16a
Gene Name C-type lectin domain family 16, member A
Synonyms 4932416N17Rik; curt; mKIAA0350
Species Mus musculus
Ensembl Gene ENSMUSG00000068663
Encoded Proteins
IDBP-132524
C-type lectin domain family 16, member A
IDBP-132526
C-type lectin domain family 16, member A
IDBP-248779
C-type lectin domain family 16, member A
IDBP-248781
C-type lectin domain family 16, member A
IDBP-248785
C-type lectin domain family 16, member A
IDBP-248787
C-type lectin domain family 16, member A
IDBP-541339
C-type lectin domain family 16, member A
IDBP-534739
C-type lectin domain family 16, member A
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000038532:
This gene encodes a member of the C-type lectin domain containing family. Single nucleotide polymorphisms in introns of this gene have been associated with diabetes mellitus, multiple sclerosis and rheumatoid arthritis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 16:10545339-10744878
Strand Forward strand
Band A1
Transcripts
ENSMUST00000066345 ENSMUSP00000065423
ENSMUST00000038145 ENSMUSP00000040267
ENSMUST00000115828 ENSMUSP00000111494
ENSMUST00000115827 ENSMUSP00000111493
ENSMUST00000115824 ENSMUSP00000111490
ENSMUST00000115823 ENSMUSP00000111489
ENSMUST00000155633 ENSMUSP00000123189
ENSMUST00000130148
ENSMUST00000150894 ENSMUSP00000114577
ENSMUST00000122856
ENSMUST00000145866
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000038532
View Gene Order
ENSBTAG00000005208
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.159176
RefSeq NM_001204229 NM_177562 XM_006522665
OMIM
CCDS CCDS37253 CCDS57018
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca