Version 5.4
Homo sapiens Gene: CLEC16A
Summary
InnateDB Gene IDBG-14527.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CLEC16A
Gene Name C-type lectin domain family 16, member A
Synonyms Gop-1; KIAA0350
Species Homo sapiens
Ensembl Gene ENSG00000038532
Encoded Proteins
IDBP-14529
C-type lectin domain family 16, member A
IDBP-294432
C-type lectin domain family 16, member A
IDBP-294426
C-type lectin domain family 16, member A
IDBP-368530
C-type lectin domain family 16, member A
IDBP-368533
C-type lectin domain family 16, member A
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a member of the C-type lectin domain containing family. Single nucleotide polymorphisms in introns of this gene have been associated with diabetes mellitus, multiple sclerosis and rheumatoid arthritis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 16:10944488-11182189
Strand Forward strand
Band p13.13
Transcripts
ENST00000261657 ENSP00000261657
ENST00000409790 ENSP00000387122
ENST00000409552 ENSP00000386495
ENST00000428742 ENSP00000389743
ENST00000436973 ENSP00000389963
ENST00000494853
ENST00000463896
ENST00000476025
ENST00000465491
ENST00000487189
ENST00000463459
ENST00000459723
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000068663
View Gene Order
ENSBTAG00000005208
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.35490 Hs.606287
RefSeq NM_001243403 NM_015226 XM_005255210 XM_005255215 XM_005255216 XM_006720870
HUGO
OMIM
CCDS CCDS45409 CCDS58423
HPRD 17185
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca