Version 5.4
Mus musculus Gene: Sytl3
Summary
InnateDB Gene IDBG-133919.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sytl3
Gene Name synaptotagmin-like 3
Synonyms A430092N21; mFLJ00307; Slp3; Slp3-a; Slp3-b
Species Mus musculus
Ensembl Gene ENSMUSG00000041831
Encoded Proteins
IDBP-133925
synaptotagmin-like 3
IDBP-248922
synaptotagmin-like 3
IDBP-532471
synaptotagmin-like 3
IDBP-532988
synaptotagmin-like 3
IDBP-542755
synaptotagmin-like 3
IDBP-531593
synaptotagmin-like 3
IDBP-539324
synaptotagmin-like 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000164674:
The protein encoded by this gene belongs to the family of synaptotagmin-like proteins (SLPs). SLPs are peripheral membrane proteins that interact with RAB27A protein, and play a role in vesicular trafficking. Unlike, SLPs 1 and 2, this protein binds phospholipids in the presence of calcium ions. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jun 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 17:6673458-6738042
Strand Forward strand
Band A1
Transcripts
ENSMUST00000097430 ENSMUSP00000095041
ENSMUST00000115763 ENSMUSP00000111429
ENSMUST00000162013
ENSMUST00000159394 ENSMUSP00000124146
ENSMUST00000162635 ENSMUSP00000124496
ENSMUST00000160483 ENSMUSP00000123996
ENSMUST00000161118 ENSMUSP00000124198
ENSMUST00000159880 ENSMUSP00000125469
ENSMUST00000160771
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0005543 phospholipid binding
GO:0005544 calcium-dependent phospholipid binding
GO:0008270 zinc ion binding
GO:0017137 Rab GTPase binding
GO:0042043 neurexin family protein binding
Biological Process
GO:0006886 intracellular protein transport
GO:0006887 exocytosis
Cellular Component
GO:0012505 endomembrane system
GO:0016020 membrane
GO:0019897 extrinsic component of plasma membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000164674
View Gene Order
ENSBTAG00000010334
Not yet available
Cross-References
SwissProt
TrEMBL E0CYH1
UniProt Splice Variant
Entrez Gene 83672
UniGene
RefSeq NM_031395 NM_183368 NM_183370 XM_006523258 XM_006523259 XM_006523261 XM_006523262 XM_006523263 XM_006523264
OMIM
CCDS CCDS28372 CCDS28373 CCDS28374
HPRD
IMGT
MGI ID MGI:1933367
MGI Symbol Sytl3
EMBL AC167249 AC168090
GenPept
RNA Seq Atlas 101055731 101055745 83672

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca