Version 5.4
Homo sapiens Gene: CNTN6
Summary
InnateDB Gene IDBG-13400.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CNTN6
Gene Name contactin 6
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000134115
Encoded Proteins
IDBP-13402
contactin 6
IDBP-235276
contactin 6
IDBP-241944
contactin 6
IDBP-360643
contactin 6
IDBP-360652
contactin 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary The protein encoded by this gene is a member of the immunoglobulin superfamily. It is a glycosylphosphatidylinositol (GPI)-anchored neuronal membrane protein that functions as a cell adhesion molecule. It may play a role in the formation of axon connections in the developing nervous system. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:1092576-1404217
Strand Forward strand
Band p26.3
Transcripts
ENST00000350110 ENSP00000341882
ENST00000397479 ENSP00000380616
ENST00000394261 ENSP00000377804
ENST00000413210 ENSP00000408460
ENST00000446702 ENSP00000407822
ENST00000485257
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0007155 cell adhesion
GO:0007219 Notch signaling pathway
GO:0007411 axon guidance
GO:0007417 central nervous system development
Cellular Component
GO:0005886 plasma membrane
GO:0031225 anchored component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000030092
View Gene Order
ENSBTAG00000003592
Not yet available
Pathways
NETPATH
REACTOME
REACT_22292
CHL1 interactions pathway
REACT_22205
L1CAM interactions pathway
REACT_111045
Developmental Biology pathway
REACT_18266
Axon guidance pathway
KEGG
INOH
PID NCI
notch_pathway
Notch signaling pathway
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.387300
RefSeq NM_001289080 NM_001289081 NM_014461
HUGO
OMIM
CCDS CCDS2557
HPRD 06242
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca