Version 5.4
Mus musculus Gene: Vps51
Summary
InnateDB Gene IDBG-134384.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Vps51
Gene Name vacuolar protein sorting 51 homolog (S. cerevisiae)
Synonyms 1110014N23Rik; 3110057M17Rik; AI837850; Ffr
Species Mus musculus
Ensembl Gene ENSMUSG00000024797
Encoded Proteins
IDBP-134386
RIKEN cDNA 1110014N23 gene
IDBP-533350
RIKEN cDNA 1110014N23 gene
IDBP-541322
RIKEN cDNA 1110014N23 gene
IDBP-541316
RIKEN cDNA 1110014N23 gene
IDBP-534753
RIKEN cDNA 1110014N23 gene
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000149823:
This gene encodes a member of the vacuolar protein sorting-associated protein 51 family. The encoded protein is a component of the Golgi-associated retrograde protein complex which acts as a tethering factor for carriers in retrograde transport from the early and late endosomes to the trans-Golgi network. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 19:6067842-6080324
Strand Reverse strand
Band A
Transcripts
ENSMUST00000025711 ENSMUSP00000025711
ENSMUST00000159832 ENSMUSP00000123994
ENSMUST00000161634
ENSMUST00000160324
ENSMUST00000159475 ENSMUSP00000124244
ENSMUST00000161222
ENSMUST00000159869
ENSMUST00000159211
ENSMUST00000160519
ENSMUST00000160233 ENSMUSP00000124842
ENSMUST00000160590 ENSMUSP00000123857
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 13 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 13 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0006869 lipid transport
GO:0006914 autophagy
GO:0007067 mitotic nuclear division
GO:0015031 protein transport
GO:0042147 retrograde transport, endosome to Golgi
Cellular Component
GO:0000775 chromosome, centromeric region
GO:0000938 GARP complex
GO:0005634 nucleus
GO:0005794 Golgi apparatus
GO:0017119 Golgi transport complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000149823
View Gene Order
ENSBTAG00000015499
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene 68505
UniGene Mm.227361
RefSeq NM_001081041
OMIM
CCDS CCDS37894
HPRD
IMGT
MGI ID MGI:1915755
MGI Symbol Vps51
EMBL
GenPept
RNA Seq Atlas 68505

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca