Version 5.4
Mus musculus Gene: Cnot3
Summary
InnateDB Gene IDBG-135865.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Cnot3
Gene Name CCR4-NOT transcription complex, subunit 3
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000035632
Encoded Proteins
IDBP-135867
CCR4-NOT transcription complex, subunit 3
IDBP-533067
CCR4-NOT transcription complex, subunit 3
IDBP-541577
CCR4-NOT transcription complex, subunit 3
IDBP-532551
CCR4-NOT transcription complex, subunit 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000088038:
Gene Information
Type Protein coding
Genomic Location Chromosome 7:3645290-3661108
Strand Forward strand
Band A1
Transcripts
ENSMUST00000038913 ENSMUSP00000039098
ENSMUST00000143085
ENSMUST00000132344 ENSMUSP00000117297
ENSMUST00000135977 ENSMUSP00000118822
ENSMUST00000129973
ENSMUST00000144097
ENSMUST00000160200 ENSMUSP00000124810
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 25 experimentally validated interaction(s) in this database.
They are also associated with 23 interaction(s) predicted by orthology.
Experimentally validated
Total 25 [view]
Protein-Protein 25 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 23 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0001829 trophectodermal cell differentiation
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006417 regulation of translation
GO:0031047 gene silencing by RNA
GO:0033147 negative regulation of intracellular estrogen receptor signaling pathway
GO:2000036 regulation of stem cell maintenance
Cellular Component
GO:0000932 cytoplasmic mRNA processing body
GO:0005634 nucleus
GO:0030014 CCR4-NOT complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000088038
View Gene Order
ENSBTAG00000014900
Not yet available
Pathways
NETPATH
REACTOME
REACT_244119
Deadenylation of mRNA pathway
REACT_233572
Gene Expression pathway
REACT_235784
Deadenylation-dependent mRNA decay pathway
KEGG
mmu03018
RNA degradation pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_20514
Deadenylation of mRNA pathway
REACT_20639
Deadenylation-dependent mRNA decay pathway
REACT_71
Gene Expression pathway
KEGG
hsa03018
RNA degradation pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.358883 Mm.487068
RefSeq NM_146176 XM_006539752 XM_006539753 XM_006539754 XM_006539755 XM_006539756
OMIM
CCDS CCDS20721
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca