Version 5.4
Mus musculus Gene: Hist1h3a
Summary
InnateDB Gene IDBG-137208.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Hist1h3a
Gene Name histone cluster 1, H3a
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000069265
Encoded Proteins
IDBP-137210
histone cluster 1, H3a
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 13:23761853-23762386
Strand Reverse strand
Band A3.1
Transcripts
ENSMUST00000091701 ENSMUSP00000089293
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006334 nucleosome assembly
GO:0006335 DNA replication-dependent nucleosome assembly
GO:0060968 regulation of gene silencing
Cellular Component
GO:0000228 nuclear chromosome
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0016020 membrane
GO:0043234 protein complex
GO:0070062 extracellular vesicular exosome
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
REACT_27235
Meiotic Recombination pathway
REACT_75800
Meiotic Synapsis pathway
REACT_245058
RNA Polymerase I Transcription pathway
REACT_188970
Oxidative Stress Induced Senescence pathway
REACT_244415
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
REACT_200794
Mus musculus biological processes pathway
REACT_249770
Cell Cycle, Mitotic pathway
REACT_200667
NoRC negatively regulates rRNA expression pathway
REACT_218274
Chromatin organization pathway
REACT_189085
Disease pathway
REACT_224553
Hemostasis pathway
REACT_214014
Signaling by Wnt pathway
REACT_256030
HDMs demethylate histones pathway
REACT_233046
Signaling by WNT in cancer pathway
REACT_188957
Cellular responses to stress pathway
REACT_198563
Amyloids pathway
REACT_226917
HATs acetylate histones pathway
REACT_256157
RNA Polymerase I Promoter Opening pathway
REACT_222475
PRC2 methylates histones and DNA pathway
REACT_198626
Meiotic synapsis pathway
REACT_188804
Cell Cycle pathway
REACT_214440
NoRC negatively regulates rRNA expression pathway
REACT_241408
M Phase pathway
REACT_196580
Condensation of Prophase Chromosomes pathway
REACT_202766
Chromatin modifying enzymes pathway
REACT_216539
formation of the beta-catenin:TCF transactivating complex pathway
REACT_188820
Cellular Senescence pathway
REACT_198649
Factors involved in megakaryocyte development and platelet production pathway
REACT_262115
misspliced LRP5 mutants have enhanced beta-catenin-dependent signaling pathway
REACT_241644
RNF mutants show enhanced WNT signaling and proliferation pathway
REACT_205737
Epigenetic regulation of gene expression pathway
REACT_270446
Transcriptional regulation by small RNAs pathway
REACT_207044
TCF dependent signaling in response to WNT pathway
REACT_224328
SIRT1 negatively regulates rRNA Expression pathway
REACT_206033
Senescence-Associated Secretory Phenotype (SASP) pathway
REACT_233572
Gene Expression pathway
REACT_268475
DNA methylation pathway
REACT_207809
Negative epigenetic regulation of rRNA expression pathway
REACT_206535
Regulatory RNA pathways pathway
REACT_244207
RMTs methylate histone arginines pathway
REACT_250557
Mitotic Prophase pathway
REACT_188257
Signal Transduction pathway
REACT_198624
Meiosis pathway
REACT_198629
Meiotic recombination pathway
REACT_257106
HDACs deacetylate histones pathway
REACT_240511
RNA Polymerase I Promoter Clearance pathway
REACT_259097
RNA Polymerase I Chain Elongation pathway
REACT_241402
XAV939 inhibits tankyrase, stabilizing AXIN pathway
KEGG
mmu05322
Systemic lupus erythematosus pathway
INOH
PID NCI
Cross-References
SwissProt P68433
TrEMBL A1L0V4
UniProt Splice Variant
Entrez Gene 97908
UniGene Mm.221301
RefSeq NM_013550
OMIM
CCDS CCDS26368
HPRD
IMGT
MGI ID MGI:2668828
MGI Symbol Hist1h3a
EMBL AK006742 AK018952 AK155722 AL589651 AL590388 AY158944 AY158945 AY158946 AY158952 BC107285 BC107287 BC115816 BC116383 BC125355 BC125357 BC127148 M32460 M32462 U62670 U62672 X01684 X16496 Y12290
GenPept AAA37811 AAA37813 AAB04763 AAB04765 AAI07286 AAI07288 AAI15817 AAI16384 AAI25356 AAI25358 AAI27149 AAO06254 AAO06255 AAO06256 AAO06262 BAB24722 BAB31493 BAE33402 CAA25839 CAA34512 CAA72968 CAI24105 CAI24113 CAI25837
RNA Seq Atlas 319152 319153 360198 97908

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

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Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca