Version 5.4
Mus musculus Gene: Phf17
Summary
InnateDB Gene IDBG-141988.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Phf17
Gene Name PHD finger protein 17
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000025764
Encoded Proteins
IDBP-141992
PHD finger protein 17
IDBP-624720
PHD finger protein 17
IDBP-624721
PHD finger protein 17
IDBP-624723
PHD finger protein 17
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000077684:
Gene Information
Type Protein coding
Genomic Location Chromosome 3:41555734-41616862
Strand Forward strand
Band B
Transcripts
ENSMUST00000026865 ENSMUSP00000026865
ENSMUST00000163764 ENSMUSP00000128152
ENSMUST00000170711 ENSMUSP00000127113
ENSMUST00000168086 ENSMUSP00000131441
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 13 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 13 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0001105 RNA polymerase II transcription coactivator activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006915 apoptotic process
GO:0043966 histone H3 acetylation
GO:0043981 histone H4-K5 acetylation
GO:0043982 histone H4-K8 acetylation
GO:0043983 histone H4-K12 acetylation
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:2000134 negative regulation of G1/S transition of mitotic cell cycle
Cellular Component
GO:0000123 histone acetyltransferase complex
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005886 plasma membrane
GO:0045171 intercellular bridge
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000077684
View Gene Order
ENSBTAG00000017493
Not yet available
Pathways
NETPATH
REACTOME
REACT_218274
Chromatin organization pathway
REACT_226917
HATs acetylate histones pathway
REACT_202766
Chromatin modifying enzymes pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_172610
HATs acetylate histones pathway
REACT_172623
Chromatin organization pathway
REACT_172633
Chromatin modifying enzymes pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.286285 Mm.466983 Mm.481413
RefSeq NM_001130184 NM_001130185 NM_001130186 NM_172303 XM_006500783 XM_006500784 XM_006500785
OMIM
CCDS CCDS17331
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca