Version 5.4
Homo sapiens Gene: PHF17
Summary
InnateDB Gene IDBG-37885.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PHF17
Gene Name PHD finger protein 17
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000077684
Encoded Proteins
IDBP-37887
PHD finger protein 17
IDBP-377675
PHD finger protein 17
IDBP-377676
PHD finger protein 17
IDBP-484176
PHD finger protein 17
IDBP-475427
PHD finger protein 17
IDBP-476373
PHD finger protein 17
IDBP-483539
PHD finger protein 17
IDBP-481607
PHD finger protein 17
IDBP-477601
PHD finger protein 17
IDBP-477531
PHD finger protein 17
IDBP-476339
PHD finger protein 17
IDBP-477366
PHD finger protein 17
IDBP-808668
jade family PHD finger 1
IDBP-808669
jade family PHD finger 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 4:128809623-128875224
Strand Forward strand
Band q28.2
Transcripts
ENST00000226319 ENSP00000226319
ENST00000452328 ENSP00000388015
ENST00000413543 ENSP00000404211
ENST00000511647 ENSP00000423737
ENST00000504089 ENSP00000426590
ENST00000512960 ENSP00000425730
ENST00000503785 ENSP00000422445
ENST00000514740 ENSP00000426920
ENST00000510308 ENSP00000421265
ENST00000511925 ENSP00000421778
ENST00000507833 ENSP00000424280
ENST00000508997 ENSP00000425535
ENST00000611140 ENSP00000482212
ENST00000610919 ENSP00000483219
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 31 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Experimentally validated
Total 31 [view]
Protein-Protein 31 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0001105 RNA polymerase II transcription coactivator activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
Biological Process
GO:0006325 chromatin organization
GO:0006351 transcription, DNA-templated
GO:0006915 apoptotic process
GO:0006950 response to stress
GO:0030308 negative regulation of cell growth
GO:0043966 histone H3 acetylation
GO:0043981 histone H4-K5 acetylation
GO:0043982 histone H4-K8 acetylation
GO:0043983 histone H4-K12 acetylation
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:2000134 negative regulation of G1/S transition of mitotic cell cycle
Cellular Component
GO:0000123 histone acetyltransferase complex
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0005886 plasma membrane
GO:0045171 intercellular bridge
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000025764
View Gene Order
ENSBTAG00000017493
Not yet available
Pathways
NETPATH
REACTOME
REACT_172610
HATs acetylate histones pathway
REACT_172623
Chromatin organization pathway
REACT_172633
Chromatin modifying enzymes pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene 79960
UniGene Hs.12420 Hs.617077 Hs.623756
RefSeq NM_001287437 NM_001287439 NM_001287440 NM_001287441 NM_001287442 NM_001287443 NM_024900 NM_199320 XM_005263229 XM_005263232 XM_006714310
HUGO HGNC:30027
OMIM 610514
CCDS CCDS34062 CCDS47134 CCDS75191
HPRD 10151
IMGT
EMBL
GenPept
RNA Seq Atlas 79960

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca