Version 5.4
Mus musculus Gene: Rab3d
Summary
InnateDB Gene IDBG-142093.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rab3d
Gene Name RAB3D, member RAS oncogene family
Synonyms C130057E11Rik
Species Mus musculus
Ensembl Gene ENSMUSG00000019066
Encoded Proteins
IDBP-249827
RAB3D, member RAS oncogene family
IDBP-401565
RAB3D, member RAS oncogene family
IDBP-401564
RAB3D, member RAS oncogene family
IDBP-539114
RAB3D, member RAS oncogene family
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000105514:
Gene Information
Type Protein coding
Genomic Location Chromosome 9:21907491-21918192
Strand Reverse strand
Band A3
Transcripts
ENSMUST00000115351 ENSMUSP00000111008
ENSMUST00000119055 ENSMUSP00000114106
ENSMUST00000122211 ENSMUSP00000113322
ENSMUST00000128442 ENSMUSP00000120067
ENSMUST00000154019
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 10 interaction(s) predicted by orthology.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 10 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
GO:0051020 GTPase binding
Biological Process
GO:0006184 GTP catabolic process
GO:0006886 intracellular protein transport
GO:0006887 exocytosis
GO:0006913 nucleocytoplasmic transport
GO:0007165 signal transduction
GO:0007264 small GTPase mediated signal transduction
GO:0015031 protein transport
GO:0017157 regulation of exocytosis
GO:0018125 peptidyl-cysteine methylation
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0030133 transport vesicle
GO:0042588 zymogen granule
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000105514
View Gene Order
ENSBTAG00000002148
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu04972
Pancreatic secretion pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa04972
Pancreatic secretion pathway
INOH
PID NCI
Cross-References
SwissProt P35276
TrEMBL D3YWL1 Q543Q4 Q8BP17
UniProt Splice Variant
Entrez Gene 19340
UniGene Mm.260157
RefSeq XM_006510103 NM_031874
OMIM
CCDS CCDS22912
HPRD
IMGT
MGI ID MGI:97844
MGI Symbol Rab3d
EMBL AB232590 AC166992 AF263365 AF263366 AK048395 AK078462 AK169369 BC010779 BC020010 CH466522 M89777
GenPept AAA40026 AAF82769 AAF82770 AAH10779 AAH20010 BAC33323 BAC37287 BAE41117 BAF02852 EDL25219 EDL25220 EDL25221 EDL25222 EDL25224
RNA Seq Atlas 19340

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca