Version 5.4
Mus musculus Protein: Rab3d
Summary
InnateDB Protein IDBP-539114.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rab3d
Protein Name RAB3D, member RAS oncogene family
Synonyms C130057E11Rik;
Species Mus musculus
Ensembl Protein ENSMUSP00000120067
InnateDB Gene IDBG-142093 (Rab3d)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 10 interaction(s) predicted by orthology.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 10 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0005525 GTP binding
GO:0051020 GTPase binding
Biological Process
GO:0007264 small GTPase mediated signal transduction
GO:0015031 protein transport
GO:0017157 regulation of exocytosis
GO:0018125 peptidyl-cysteine methylation
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0030133 transport vesicle
GO:0042588 zymogen granule
Protein Structure and Domains
PDB ID MGI:97844
InterPro IPR001806 Small GTPase superfamily
IPR003579 Small GTPase superfamily, Rab type
IPR005225 Small GTP-binding protein domain
IPR006689 Small GTPase superfamily, ARF/SAR type
IPR006762 Gtr1/RagA G protein
IPR013684 Mitochondrial Rho-like
IPR027417 P-loop containing nucleoside triphosphate hydrolase
PFAM PF00071
PF00025
PF04670
PF08477
PRINTS PR00449
PR00328
PIRSF
SMART SM00175
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL D3YWL1
UniProt Splice Variant
Entrez Gene 19340
UniGene Mm.260157
RefSeq
MGI ID
MGI Symbol Rab3d
OMIM
CCDS
HPRD
IMGT
EMBL AC166992
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca