Version 5.4
Mus musculus Gene: Rnf38
Summary
InnateDB Gene IDBG-143256.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rnf38
Gene Name ring finger protein 38
Synonyms 1700065B19Rik; 2610202O07Rik; AA673263; Oip1
Species Mus musculus
Ensembl Gene ENSMUSG00000035696
Encoded Proteins
IDBP-143258
ring finger protein 38
IDBP-143260
ring finger protein 38
IDBP-143262
ring finger protein 38
IDBP-265824
ring finger protein 38
IDBP-542671
ring finger protein 38
IDBP-535627
ring finger protein 38
IDBP-539467
ring finger protein 38
IDBP-542669
ring finger protein 38
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000137075:
This gene encodes a protein with a coiled-coil motif and a RING-H2 motif (C3H2C2) at its carboxy-terminus. The RING motif is a zinc-binding domain found in a large set of proteins playing roles in diverse cellular processes including oncogenesis, development, signal transduction, and apoptosis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 4:44126210-44233789
Strand Reverse strand
Band B1
Transcripts
ENSMUST00000045793 ENSMUSP00000038477
ENSMUST00000102934 ENSMUSP00000099998
ENSMUST00000098098 ENSMUSP00000095702
ENSMUST00000107836 ENSMUSP00000103467
ENSMUST00000136730 ENSMUSP00000116642
ENSMUST00000148869
ENSMUST00000145378
ENSMUST00000152216
ENSMUST00000128426 ENSMUSP00000119889
ENSMUST00000145760 ENSMUSP00000121329
ENSMUST00000143337 ENSMUSP00000122342
ENSMUST00000153384
ENSMUST00000137194
ENSMUST00000123844
ENSMUST00000129621
ENSMUST00000153116
ENSMUST00000147302
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 11 interaction(s) predicted by orthology.
Predicted by orthology
Total 11 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004842 ubiquitin-protein transferase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0016874 ligase activity
GO:0046872 metal ion binding
Biological Process
GO:0008584 male gonad development
GO:0016567 protein ubiquitination
Cellular Component
GO:0005634 nucleus
GO:0036126 sperm flagellum
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000137075
View Gene Order
ENSBTAG00000005519
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.262859 Mm.418420
RefSeq NM_001038993 NM_175201 XM_006538298 XM_006538299 XM_006538300 XM_006538301 XM_006538302 XM_006538303 XM_006538304 XM_006538305 XM_006538306
OMIM
CCDS CCDS18122 CCDS18123
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca