Version 5.4
Mus musculus Gene: Srrm2
Summary
InnateDB Gene IDBG-144289.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Srrm2
Gene Name serine/arginine repetitive matrix 2
Synonyms 5033413A03Rik; AA410130; mKIAA0324; SRm300
Species Mus musculus
Ensembl Gene ENSMUSG00000039218
Encoded Proteins
IDBP-144295
serine/arginine repetitive matrix 2
IDBP-787541
serine/arginine repetitive matrix 2
IDBP-787542
serine/arginine repetitive matrix 2
IDBP-787543
serine/arginine repetitive matrix 2
IDBP-787544
serine/arginine repetitive matrix 2
IDBP-787545
serine/arginine repetitive matrix 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000167978:
Gene Information
Type Protein coding
Genomic Location Chromosome 17:23790662-23824741
Strand Forward strand
Band A3.3
Transcripts
ENSMUST00000088621 ENSMUSP00000085993
ENSMUST00000186961 ENSMUSP00000140813
ENSMUST00000190686 ENSMUSP00000139842
ENSMUST00000191385 ENSMUSP00000139901
ENSMUST00000190293
ENSMUST00000186045 ENSMUSP00000139914
ENSMUST00000189977
ENSMUST00000186914
ENSMUST00000186259 ENSMUSP00000140531
ENSMUST00000190568
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 10 experimentally validated interaction(s) in this database.
They are also associated with 173 interaction(s) predicted by orthology.
Experimentally validated
Total 10 [view]
Protein-Protein 10 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 173 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0044822 poly(A) RNA binding
GO:0047485 protein N-terminus binding
GO:0070742 C2H2 zinc finger domain binding
Biological Process
GO:0006397 mRNA processing
GO:0008150 biological_process
GO:0008380 RNA splicing
Cellular Component
GO:0005634 nucleus
GO:0015030 Cajal body
GO:0016607 nuclear speck
GO:0071013 catalytic step 2 spliceosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000167978
View Gene Order
ENSBTAG00000012683
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
NetPath_24
TSLP pathway
REACTOME
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_175229 XM_006525076 XM_006525077 XM_006525078 XM_006525079
OMIM
CCDS CCDS37475
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca