Version 5.4
Mus musculus Gene: Prdm6
Summary
InnateDB Gene IDBG-147047.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Prdm6
Gene Name PR domain containing 6
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000069378
Encoded Proteins
IDBP-147049
PR domain containing 6
IDBP-249729
PR domain containing 6
IDBP-249731
PR domain containing 6
IDBP-541002
PR domain containing 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000061455:
Gene Information
Type Protein coding
Genomic Location Chromosome 18:53464546-53575907
Strand Forward strand
Band D1
Transcripts
ENSMUST00000091900 ENSMUSP00000089513
ENSMUST00000115399 ENSMUSP00000111057
ENSMUST00000115398 ENSMUSP00000111056
ENSMUST00000154557 ENSMUSP00000114644
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0005515 protein binding
GO:0018024 histone-lysine N-methyltransferase activity
GO:0042803 protein homodimerization activity
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0022008 neurogenesis
GO:0034968 histone lysine methylation
GO:0045892 negative regulation of transcription, DNA-templated
GO:0051151 negative regulation of smooth muscle cell differentiation
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000061455
View Gene Order
ENSBTAG00000020578
Not yet available
Cross-References
SwissProt Q3UZD5
TrEMBL
UniProt Splice Variant
Entrez Gene 225518
UniGene Mm.297645
RefSeq NM_001033281 XM_006525873
OMIM
CCDS CCDS29253
HPRD
IMGT
MGI ID MGI:2684938
MGI Symbol Prdm6
EMBL AK133910 AK135836 AK135840 BC139295 DQ340564 DQ340565
GenPept AAI39296 ABC69307 ABC69308 BAE21922 BAE22684 BAE22688
RNA Seq Atlas 225518

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca