Version 5.4
Mus musculus Gene: Atraid
Summary
InnateDB Gene IDBG-147066.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Atraid
Gene Name all-trans retinoic acid induced differentiation factor
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000013622
Encoded Proteins
IDBP-147068
RIKEN cDNA 0610007C21 gene
IDBP-251311
RIKEN cDNA 0610007C21 gene
IDBP-251313
RIKEN cDNA 0610007C21 gene
IDBP-540894
RIKEN cDNA 0610007C21 gene
IDBP-532769
RIKEN cDNA 0610007C21 gene
IDBP-625746
RIKEN cDNA 0610007C21 gene
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000138085:
This gene is thought to be involved in apoptosis, and may also be involved in hematopoietic development and differentiation. The use of alternative splice sites and promotors result in multiple transcript variants encoding different isoforms.[provided by RefSeq, Dec 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:31048312-31054633
Strand Forward strand
Band B1
Transcripts
ENSMUST00000013766 ENSMUSP00000013766
ENSMUST00000114660 ENSMUSP00000110308
ENSMUST00000114659 ENSMUSP00000110307
ENSMUST00000130250 ENSMUSP00000118781
ENSMUST00000138309
ENSMUST00000153643 ENSMUSP00000119961
ENSMUST00000133215
ENSMUST00000173215 ENSMUSP00000133685
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0008150 biological_process
GO:0010468 regulation of gene expression
GO:0030154 cell differentiation
GO:0030501 positive regulation of bone mineralization
GO:0033689 negative regulation of osteoblast proliferation
GO:0045669 positive regulation of osteoblast differentiation
GO:2000599 negative regulation of cyclin catabolic process
Cellular Component
GO:0005635 nuclear envelope
GO:0005886 plasma membrane
GO:0016021 integral component of membrane
GO:0048471 perinuclear region of cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000138085
View Gene Order
ENSBTAG00000031185
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.28144
RefSeq NM_027855 NM_212470
OMIM
CCDS CCDS19170
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca