Version 5.4
Mus musculus Gene: Snx17
Summary
InnateDB Gene IDBG-148201.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Snx17
Gene Name sorting nexin 17
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000029146
Encoded Proteins
IDBP-148203
sorting nexin 17
IDBP-542103
sorting nexin 17
IDBP-725092
IDBP-533700
sorting nexin 17
IDBP-725138
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000115234:
This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. This protein does not contain a coiled coil region, like some family members, but contains a B41 domain. This protein interacts with the cytoplasmic domain of P-selectin, and may function in the intracellular trafficking of P-selectin. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, May 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:31193227-31198900
Strand Forward strand
Band B1
Transcripts
ENSMUST00000031029 ENSMUSP00000031029
ENSMUST00000133711 ENSMUSP00000116810
ENSMUST00000147145 ENSMUSP00000135387
ENSMUST00000138986
ENSMUST00000132471 ENSMUSP00000116961
ENSMUST00000125603 ENSMUSP00000135484
ENSMUST00000153069
ENSMUST00000129873
ENSMUST00000154815
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 19 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 19 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008022 protein C-terminus binding
GO:0035091 phosphatidylinositol binding
GO:0050750 low-density lipoprotein particle receptor binding
Biological Process
GO:0006898 receptor-mediated endocytosis
GO:0007165 signal transduction
GO:0015031 protein transport
Cellular Component
GO:0005737 cytoplasm
GO:0005768 endosome
GO:0005769 early endosome
GO:0005794 Golgi apparatus
GO:0005829 cytosol
GO:0005856 cytoskeleton
GO:0010008 endosome membrane
GO:0016023 cytoplasmic membrane-bounded vesicle
GO:0030659 cytoplasmic vesicle membrane
GO:0043231 intracellular membrane-bounded organelle
GO:0043234 protein complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000115234
View Gene Order
ENSBTAG00000019515
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.6118
RefSeq NM_153680 XM_006503966
OMIM
CCDS CCDS19177
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca