Version 5.4
Mus musculus Gene: Trappc6a
Summary
InnateDB Gene IDBG-150944.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Trappc6a
Gene Name trafficking protein particle complex 6A
Synonyms 1810073E21Rik; 4930519D19Rik; AI480686; mhyp; TRS33
Species Mus musculus
Ensembl Gene ENSMUSG00000002043
Encoded Proteins
IDBP-150946
trafficking protein particle complex 6A
IDBP-264501
trafficking protein particle complex 6A
IDBP-535830
trafficking protein particle complex 6A
IDBP-541184
trafficking protein particle complex 6A
IDBP-536796
trafficking protein particle complex 6A
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000007255:
This gene encodes a component of the trafficking protein particle complex, which tethers transport vesicles to the cis-Golgi membrane. Loss of expression of the related gene in mouse affects coat and eye pigmentation, suggesting that the encoded protein may be involved in melanosome biogenesis. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Aug 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 7:19508670-19516145
Strand Forward strand
Band A3
Transcripts
ENSMUST00000002112 ENSMUSP00000002112
ENSMUST00000108455 ENSMUSP00000104095
ENSMUST00000136873 ENSMUSP00000119036
ENSMUST00000147114 ENSMUSP00000116737
ENSMUST00000129808
ENSMUST00000135972 ENSMUSP00000120406
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 12 interaction(s) predicted by orthology.
Predicted by orthology
Total 12 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0016192 vesicle-mediated transport
Cellular Component
GO:0005783 endoplasmic reticulum
GO:0005794 Golgi apparatus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000007255
View Gene Order
ENSBTAG00000007065
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.44213
RefSeq NM_025960 XM_006540308 XM_006540309
OMIM
CCDS CCDS20905
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca