Version 5.4
Homo sapiens Gene: TRAPPC6A
Summary
InnateDB Gene IDBG-57163.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TRAPPC6A
Gene Name trafficking protein particle complex 6A
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000007255
Encoded Proteins
IDBP-57165
trafficking protein particle complex 6A
IDBP-764828
IDBP-762525
IDBP-763451
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a component of the trafficking protein particle complex, which tethers transport vesicles to the cis-Golgi membrane. Loss of expression of the related gene in mouse affects coat and eye pigmentation, suggesting that the encoded protein may be involved in melanosome biogenesis. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Aug 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 19:45162928-45178237
Strand Reverse strand
Band q13.32
Transcripts
ENST00000006275 ENSP00000006275
ENST00000588062 ENSP00000468363
ENST00000585934 ENSP00000468612
ENST00000587818
ENST00000592647 ENSP00000468182
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 21 experimentally validated interaction(s) in this database.
Experimentally validated
Total 21 [view]
Protein-Protein 20 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0016192 vesicle-mediated transport
Cellular Component
GO:0005783 endoplasmic reticulum
GO:0005794 Golgi apparatus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000002043
View Gene Order
ENSBTAG00000007065
Not yet available
Cross-References
SwissProt O75865
TrEMBL
UniProt Splice Variant
Entrez Gene 79090
UniGene
RefSeq NM_001270892 NM_001270891 NM_001270893 NM_024108
HUGO HGNC:23069
OMIM 610396
CCDS CCDS59395 CCDS12655 CCDS59396 CCDS59397
HPRD 14503
IMGT
EMBL AC005757 AF161407 BC001907 BC004450
GenPept AAC62259 AAF28967 AAH01907 AAH04450
RNA Seq Atlas 79090

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca