Version 5.4
Mus musculus Gene: Ttc5
Summary
InnateDB Gene IDBG-156250.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ttc5
Gene Name tetratricopeptide repeat domain 5
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000006288
Encoded Proteins
IDBP-156252
tetratricopeptide repeat domain 5
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000136319:
Gene Information
Type Protein coding
Genomic Location Chromosome 14:50765415-50785518
Strand Reverse strand
Band C1
Transcripts
ENSMUST00000006451 ENSMUSP00000006451
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0005515 protein binding
Biological Process
GO:0006281 DNA repair
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000136319
View Gene Order
ENSBTAG00000009372
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
INOH
PID NCI
p53regulationpathway
p53 pathway
Cross-References
SwissProt Q99LG4
TrEMBL
UniProt Splice Variant
Entrez Gene 219022
UniGene Mm.390738 Mm.417496
RefSeq NM_001080949
OMIM
CCDS CCDS36905
HPRD
IMGT
MGI ID MGI:2683584
MGI Symbol Ttc5
EMBL AK157777 AK161279 BC003272 BC025610 BC092074
GenPept AAH03272 AAH25610 AAH92074 BAE34192 BAE36290
RNA Seq Atlas 219022

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca