Version 5.4
Mus musculus Gene: H2afy2
Summary
InnateDB Gene IDBG-156383.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol H2afy2
Gene Name H2A histone family, member Y2
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000020086
Encoded Proteins
IDBP-156385
H2A histone family, member Y2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000099284:
Gene Information
Type Protein coding
Genomic Location Chromosome 10:61738665-61784147
Strand Reverse strand
Band B4
Transcripts
ENSMUST00000020283 ENSMUSP00000020283
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 11 interaction(s) predicted by orthology.
Predicted by orthology
Total 11 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0031490 chromatin DNA binding
GO:0044212 transcription regulatory region DNA binding
GO:0046982 protein heterodimerization activity
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006334 nucleosome assembly
GO:0007420 brain development
GO:0007549 dosage compensation
GO:0016568 chromatin modification
GO:0045814 negative regulation of gene expression, epigenetic
GO:0071169 establishment of protein localization to chromatin
GO:1901837 negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter
Cellular Component
GO:0000786 nucleosome
GO:0000790 nuclear chromatin
GO:0001740 Barr body
GO:0005634 nucleus
GO:0035098 ESC/E(Z) complex
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000099284
View Gene Order
ENSBTAG00000001163
Not yet available
Pathways
NETPATH
REACTOME
REACT_27235
Meiotic Recombination pathway
REACT_75800
Meiotic Synapsis pathway
REACT_200794
Mus musculus biological processes pathway
REACT_200667
NoRC negatively regulates rRNA expression pathway
REACT_198626
Meiotic synapsis pathway
REACT_188804
Cell Cycle pathway
REACT_214440
NoRC negatively regulates rRNA expression pathway
REACT_205737
Epigenetic regulation of gene expression pathway
REACT_233572
Gene Expression pathway
REACT_268475
DNA methylation pathway
REACT_207809
Negative epigenetic regulation of rRNA expression pathway
REACT_198624
Meiosis pathway
KEGG
mmu05322
Systemic lupus erythematosus pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa05322
Systemic lupus erythematosus pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_207000 XM_006513833
OMIM
CCDS CCDS23885
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca