Version 5.4
Mus musculus Gene: Pcgf1
Summary
InnateDB Gene IDBG-159954.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Pcgf1
Gene Name polycomb group ring finger 1
Synonyms 2010002K04Rik; AU024121; Nspc1
Species Mus musculus
Ensembl Gene ENSMUSG00000069678
Encoded Proteins
IDBP-159956
polycomb group ring finger 1
IDBP-620085
polycomb group ring finger 1
IDBP-716354
IDBP-715006
IDBP-716160
IDBP-715884
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000115289:
PCGF1 is a mammalian homolog of the Drosophila polycomb group genes, which act as transcriptional repressors to regulate anterior-posterior patterning in early embryonic development (Nunes et al., 2001 [PubMed 11287196]). See also PCGF2 (MIM 600346).[supplied by OMIM, Aug 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:83077869-83080855
Strand Forward strand
Band C3
Transcripts
ENSMUST00000092614 ENSMUSP00000090277
ENSMUST00000165164 ENSMUSP00000130614
ENSMUST00000176100 ENSMUSP00000135882
ENSMUST00000176027 ENSMUSP00000135664
ENSMUST00000177177 ENSMUSP00000135291
ENSMUST00000176372
ENSMUST00000176089 ENSMUSP00000135268
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 24 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 24 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008022 protein C-terminus binding
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0035518 histone H2A monoubiquitination
Cellular Component
GO:0005634 nucleus
GO:0031519 PcG protein complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000115289
View Gene Order
ENSBTAG00000016606
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.396954
RefSeq NM_197992
OMIM
CCDS CCDS20270
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca