Mus musculus Gene: Snrpa | |||||||||||||||||||||||
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Summary | |||||||||||||||||||||||
InnateDB Gene | IDBG-160103.6 | ||||||||||||||||||||||
Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||||||||||||||||
Gene Symbol | Snrpa | ||||||||||||||||||||||
Gene Name | small nuclear ribonucleoprotein polypeptide A | ||||||||||||||||||||||
Synonyms | C430021M15Rik; Rnu1a-1; Rnu1a1; U1-A; U1A | ||||||||||||||||||||||
Species | Mus musculus | ||||||||||||||||||||||
Ensembl Gene | ENSMUSG00000061479 | ||||||||||||||||||||||
Encoded Proteins |
small nuclear ribonucleoprotein polypeptide A
small nuclear ribonucleoprotein polypeptide A
small nuclear ribonucleoprotein polypeptide A
small nuclear ribonucleoprotein polypeptide A
small nuclear ribonucleoprotein polypeptide A
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Protein Structure | |||||||||||||||||||||||
Useful resources | Stemformatics EHFPI ImmGen | ||||||||||||||||||||||
Entrez Gene | |||||||||||||||||||||||
Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000077312:
The protein encoded by this gene associates with stem loop II of the U1 small nuclear ribonucleoprotein, which binds the 5' splice site of precursor mRNAs and is required for splicing. The encoded protein autoregulates itself by polyadenylation inhibition of its own pre-mRNA via dimerization and has been implicated in the coupling of splicing and polyadenylation. [provided by RefSeq, Oct 2010] The protein encoded by this gene associates with stem loop II of the U1 small nuclear ribonucleoprotein, which binds the 5\' splice site of precursor mRNAs and is required for splicing. The encoded protein autoregulates itself by polyadenylation inhibition of its own pre-mRNA via dimerization and has been implicated in the coupling of splicing and polyadenylation. [provided by RefSeq, Oct 2010] |
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Gene Information | |||||||||||||||||||||||
Type | Protein coding | ||||||||||||||||||||||
Genomic Location | Chromosome 7:27187005-27196271 | ||||||||||||||||||||||
Strand | Reverse strand | ||||||||||||||||||||||
Band | A3 | ||||||||||||||||||||||
Transcripts | |||||||||||||||||||||||
Interactions | |||||||||||||||||||||||
Number of Interactions |
This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
They are also associated with 57 interaction(s) predicted by orthology.
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Gene Ontology | |||||||||||||||||||||||
Molecular Function |
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Biological Process |
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Cellular Component |
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Orthologs | |||||||||||||||||||||||
Species
Homo sapiens
Bos taurus
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Gene ID
Gene Order
Not yet available
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Pathways | |||||||||||||||||||||||
NETPATH | |||||||||||||||||||||||
REACTOME |
mRNA Splicing pathway
Gene Expression pathway
mRNA Splicing - Major Pathway pathway
Processing of Capped Intron-Containing Pre-mRNA pathway
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KEGG |
Spliceosome pathway
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INOH | |||||||||||||||||||||||
PID NCI | |||||||||||||||||||||||
Pathway Predictions based on Human Orthology Data | |||||||||||||||||||||||
NETPATH | |||||||||||||||||||||||
REACTOME |
mRNA Splicing - Major Pathway pathway
Processing of Capped Intron-Containing Pre-mRNA pathway
mRNA Splicing pathway
Gene Expression pathway
mRNA Splicing - Major Pathway pathway
mRNA Splicing pathway
Gene Expression pathway
Processing of Capped Intron-Containing Pre-mRNA pathway
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KEGG |
Spliceosome pathway
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INOH | |||||||||||||||||||||||
PID NCI | |||||||||||||||||||||||
Cross-References | |||||||||||||||||||||||
SwissProt | Q62189 | ||||||||||||||||||||||
TrEMBL | D3Z0S6 | ||||||||||||||||||||||
UniProt Splice Variant | |||||||||||||||||||||||
Entrez Gene | 53607 | ||||||||||||||||||||||
UniGene | Mm.435544 | ||||||||||||||||||||||
RefSeq | XM_003688896 NM_001046637 NM_001285825 NM_015782 XM_356179 XM_990056 | ||||||||||||||||||||||
OMIM | |||||||||||||||||||||||
CCDS | CCDS21014 | ||||||||||||||||||||||
HPRD | |||||||||||||||||||||||
IMGT | |||||||||||||||||||||||
MGI ID | MGI:1855690 | ||||||||||||||||||||||
MGI Symbol | Snrpa | ||||||||||||||||||||||
EMBL | AC157553 AC157561 BC003229 BC094006 BC096648 L15447 | ||||||||||||||||||||||
GenPept | AAC37611 AAH03229 AAH94006 AAH96648 | ||||||||||||||||||||||
RNA Seq Atlas | 53607 | ||||||||||||||||||||||