Version 5.4
Mus musculus Gene: Spata7
Summary
InnateDB Gene IDBG-162303.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Spata7
Gene Name spermatogenesis associated 7
Synonyms AI661438; B230306G18Rik; HSD3
Species Mus musculus
Ensembl Gene ENSMUSG00000021007
Encoded Proteins
IDBP-162305
spermatogenesis associated 7
IDBP-162307
spermatogenesis associated 7
IDBP-162309
spermatogenesis associated 7
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000042317:
This gene, originally isolated from testis, is also expressed in retina. Mutations in this gene are associated with Leber congenital amaurosis and juvenile retinitis pigmentosa. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 12:98628157-98669815
Strand Forward strand
Band E
Transcripts
ENSMUST00000048402 ENSMUSP00000045827
ENSMUST00000101146 ENSMUSP00000098705
ENSMUST00000101144 ENSMUSP00000098704
ENSMUST00000155899
ENSMUST00000130136
ENSMUST00000152482
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0007601 visual perception
GO:0008150 biological_process
GO:0050896 response to stimulus
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000042317
View Gene Order
ENSBTAG00000030456
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.444538
RefSeq NM_001289572 NM_001289573 NM_178914 XM_006515357 XM_006515361
OMIM
CCDS CCDS26097 CCDS70413
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca