Version 5.4
Mus musculus Gene: Snx12
Summary
InnateDB Gene IDBG-163257.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Snx12
Gene Name sorting nexin 12
Synonyms 2610001F05Rik; AW045757; SDP8
Species Mus musculus
Ensembl Gene ENSMUSG00000046032
Encoded Proteins
IDBP-163259
sorting nexin 12
IDBP-400711
sorting nexin 12
IDBP-538800
sorting nexin 12
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000147164:
This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. This protein does not contain a coiled coil region, like some family members. A similar protein in mouse may be involved in regulating the neurite outgrowth. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Jan 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome X:101097786-101222563
Strand Reverse strand
Band D
Transcripts
ENSMUST00000077876 ENSMUSP00000077038
ENSMUST00000120389 ENSMUSP00000113117
ENSMUST00000156473 ENSMUSP00000119102
ENSMUST00000130826
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 11 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 11 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0035091 phosphatidylinositol binding
Biological Process
GO:0006886 intracellular protein transport
Cellular Component
GO:0005768 endosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000147164
View Gene Order
ENSBTAG00000007871
Not yet available
Cross-References
SwissProt
TrEMBL Q6ZWQ5
UniProt Splice Variant
Entrez Gene 55988
UniGene Mm.206949 Mm.396521
RefSeq NM_001110310 NM_001110311 NM_018875
OMIM
CCDS CCDS53151 CCDS41076 CCDS53152
HPRD
IMGT
MGI ID MGI:1919331
MGI Symbol Snx12
EMBL AK049561 AK148235 AK170403 AK170992 AL671926 AL672308 CH466564
GenPept BAC33810 BAE28427 BAE41771 BAE42166 EDL14157
RNA Seq Atlas 55988

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca