Version 5.4
Mus musculus Gene: Mysm1
Summary
InnateDB Gene IDBG-164044.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Mysm1
Gene Name myb-like, SWIRM and MPN domains 1
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000062627
Encoded Proteins
IDBP-164046
myb-like, SWIRM and MPN domains 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000162601:
Gene Information
Type Protein coding
Genomic Location Chromosome 4:94942040-94979100
Strand Reverse strand
Band C5
Transcripts
ENSMUST00000075872 ENSMUSP00000075269
ENSMUST00000124820
ENSMUST00000125427
ENSMUST00000149954
ENSMUST00000134730
ENSMUST00000155935
ENSMUST00000132758
ENSMUST00000131575
ENSMUST00000136130
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 13 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 13 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003713 transcription coactivator activity
GO:0004221 ubiquitin thiolesterase activity
GO:0004843 ubiquitin-specific protease activity
GO:0005515 protein binding
GO:0008237 metallopeptidase activity
GO:0032403 protein complex binding
GO:0042393 histone binding
GO:0046872 metal ion binding
Biological Process
GO:0006338 chromatin remodeling
GO:0006351 transcription, DNA-templated
GO:0006508 proteolysis
GO:0035522 monoubiquitinated histone H2A deubiquitination
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000162601
View Gene Order
ENSBTAG00000013961
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.208868 Mm.406037 Mm.468748
RefSeq NM_177239 XM_006503166 XM_006503167 XM_006503168
OMIM
CCDS CCDS18363
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca