Version 5.4
Homo sapiens Gene: MYSM1
Summary
InnateDB Gene IDBG-99218.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol MYSM1
Gene Name Myb-like, SWIRM and MPN domains 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000162601
Encoded Proteins
IDBP-477401
Myb-like, SWIRM and MPN domains 1
IDBP-807117
Myb-like, SWIRM and MPN domains 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:58654739-58700092
Strand Reverse strand
Band p32.1
Transcripts
ENST00000401044
ENST00000472487 ENSP00000418734
ENST00000493821
ENST00000481973
ENST00000466774
ENST00000483003
ENST00000489282
ENST00000622766 ENSP00000478391
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 19 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 19 [view]
Protein-Protein 18 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003713 transcription coactivator activity
GO:0004221 ubiquitin thiolesterase activity
GO:0004843 ubiquitin-specific protease activity
GO:0005515 protein binding
GO:0008237 metallopeptidase activity
GO:0032403 protein complex binding
GO:0042393 histone binding
GO:0046872 metal ion binding
Biological Process
GO:0006338 chromatin remodeling
GO:0006351 transcription, DNA-templated
GO:0006508 proteolysis
GO:0035522 monoubiquitinated histone H2A deubiquitination
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000062627
View Gene Order
ENSBTAG00000013961
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.605692 Hs.622875
RefSeq NM_001085487 XM_006710314
HUGO
OMIM
CCDS CCDS41343
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca