Version 5.4
Mus musculus Gene: Syde1
Summary
InnateDB Gene IDBG-169417.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Syde1
Gene Name synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
Synonyms 1200008N06Rik; BB043000; mSYD1A
Species Mus musculus
Ensembl Gene ENSMUSG00000032714
Encoded Proteins
IDBP-169419
synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000105137:
Gene Information
Type Protein coding
Genomic Location Chromosome 10:78584503-78591964
Strand Reverse strand
Band C1
Transcripts
ENSMUST00000040580 ENSMUSP00000043085
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005096 GTPase activator activity
GO:0005515 protein binding
GO:0032403 protein complex binding
Biological Process
GO:0007130 synaptonemal complex assembly
GO:0007165 signal transduction
GO:0016081 synaptic vesicle docking involved in exocytosis
GO:0043547 positive regulation of GTPase activity
GO:0050806 positive regulation of synaptic transmission
Cellular Component
GO:0005622 intracellular
GO:0005829 cytosol
GO:0044300 cerebellar mossy fiber
GO:0097060 synaptic membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000105137
View Gene Order
ENSBTAG00000015184
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_11051
Rho GTPase cycle pathway
REACT_11044
Signaling by Rho GTPases pathway
REACT_111102
Signal Transduction pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.86439
RefSeq NM_027875
OMIM
CCDS CCDS48613
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca