Version 5.4
Mus musculus Gene: Atg9a
Summary
InnateDB Gene IDBG-169902.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Atg9a
Gene Name autophagy related 9A
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000033124
Encoded Proteins
IDBP-169904
autophagy-related 9A (yeast)
IDBP-789009
autophagy related 9A
IDBP-789011
autophagy related 9A
IDBP-789012
autophagy related 9A
IDBP-789013
autophagy related 9A
IDBP-789014
autophagy related 9A
IDBP-789016
autophagy related 9A
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
InnateDB Annotation from Orthologs
Summary
PMID 19926846
[Homo sapiens] ATG9A is an essential autophagy protein that functions as a regulator of innate immunity following double stranded DNA stimulation by controlling dsDNA-driven dynamic translocation of stimulator of IFN genes (STING), aka TMEM173, and TBK1.
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000198925:
Gene Information
Type Protein coding
Genomic Location Chromosome 1:75180860-75192196
Strand Reverse strand
Band C4
Transcripts
ENSMUST00000040689 ENSMUSP00000047449
ENSMUST00000189702 ENSMUSP00000139641
ENSMUST00000189820 ENSMUSP00000139608
ENSMUST00000189665 ENSMUSP00000140012
ENSMUST00000188347 ENSMUSP00000139731
ENSMUST00000187785 ENSMUSP00000139828
ENSMUST00000188430
ENSMUST00000187601
ENSMUST00000186744 ENSMUSP00000140616
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 5 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
GO:0015002 heme-copper terminal oxidase activity
Biological Process
GO:0000045 autophagic vacuole assembly
GO:0006914 autophagy
GO:0034067 protein localization to Golgi apparatus
GO:0045087 innate immune response
Cellular Component
GO:0005737 cytoplasm
GO:0005768 endosome
GO:0005770 late endosome
GO:0005776 autophagic vacuole
GO:0005802 trans-Golgi network
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000198925
View Gene Order
ENSBTAG00000020608
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_001003917 NM_001288612 NM_001288613 XM_006496491 XM_006496492
OMIM
CCDS CCDS35622
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca