Version 5.4
Mus musculus Gene: Pdzd7
Summary
InnateDB Gene IDBG-170482.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Pdzd7
Gene Name PDZ domain containing 7
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000074818
Encoded Proteins
IDBP-534507
PDZ domain containing 7
IDBP-621808
PDZ domain containing 7
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000186862:
This gene encodes a ciliary protein homologous to proteins which are mutated in Usher syndrome patients, and mutations and translocations involving this gene have been associated with two types of Usher syndrome. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 19:45026906-45046614
Strand Reverse strand
Band C3
Transcripts
ENSMUST00000038901
ENSMUST00000145391 ENSMUSP00000119002
ENSMUST00000169459 ENSMUSP00000133273
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0005929 cilium
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000186862
View Gene Order
ENSBTAG00000016928
Not yet available
Cross-References
SwissProt
TrEMBL B7ZWH5 E9Q9W7 Q8BIA7 X4ZGA7
UniProt Splice Variant
Entrez Gene 100503041
UniGene Mm.329877 Mm.484438
RefSeq NM_001195265 XM_006526536 XM_006526537 XM_006526539
OMIM
CCDS CCDS57145
HPRD
IMGT
MGI ID MGI:3608325
MGI Symbol Pdzd7
EMBL AC132957 AK033653 BC147398 BC147399 BC172054 KF041449 KF041450
GenPept AAI47399 AAI47400 AAI72054 AHV90416 AHV90417 BAC28409
RNA Seq Atlas 100503041

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca