Version 5.4
Homo sapiens Gene: PDZD7
Summary
InnateDB Gene IDBG-86901.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PDZD7
Gene Name PDZ domain containing 7
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000186862
Encoded Proteins
IDBP-86907
PDZ domain containing 7
IDBP-384543
PDZ domain containing 7
IDBP-810216
PDZ domain containing 7
IDBP-810238
PDZ domain containing 7
IDBP-810239
PDZ domain containing 7
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a ciliary protein homologous to proteins which are mutated in Usher syndrome patients, and mutations and translocations involving this gene have been associated with two types of Usher syndrome. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 10:101007683-101031157
Strand Reverse strand
Band q24.31
Transcripts
ENST00000370215 ENSP00000359234
ENST00000433616 ENSP00000412533
ENST00000474125 ENSP00000474447
ENST00000476306
ENST00000470414 ENSP00000474831
ENST00000619208 ENSP00000480489
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
Cellular Component
GO:0005615 extracellular space
GO:0005634 nucleus
GO:0005929 cilium
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000074818
View Gene Order
ENSBTAG00000016928
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.722281
RefSeq NM_001195263 NM_024895 XM_006717975
HUGO
OMIM
CCDS CCDS31269 CCDS73182
HPRD 15114
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca