Version 5.4
Mus musculus Gene: Pdzrn3
Summary
InnateDB Gene IDBG-173205.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Pdzrn3
Gene Name PDZ domain containing RING finger 3
Synonyms 1110020C07Rik; AI429718; AL023082; LNX3; SEMACAP3; Semcap3
Species Mus musculus
Ensembl Gene ENSMUSG00000035357
Encoded Proteins
IDBP-173207
PDZ domain containing RING finger 3
IDBP-535330
PDZ domain containing RING finger 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000121440:
Gene Information
Type Protein coding
Genomic Location Chromosome 6:101149609-101377897
Strand Reverse strand
Band D3
Transcripts
ENSMUST00000075994 ENSMUSP00000075376
ENSMUST00000124884
ENSMUST00000144505
ENSMUST00000151175 ENSMUSP00000117666
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004842 ubiquitin-protein transferase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0016874 ligase activity
GO:0046872 metal ion binding
Biological Process
GO:0007528 neuromuscular junction development
GO:0016567 protein ubiquitination
Cellular Component
GO:0031594 neuromuscular junction
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000121440
View Gene Order
ENSBTAG00000018644
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.321654 Mm.450845
RefSeq NM_018884
OMIM
CCDS CCDS20392
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca