Version 5.4
Mus musculus Gene: Trmt1
Summary
InnateDB Gene IDBG-174560.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Trmt1
Gene Name TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000001909
Encoded Proteins
IDBP-174562
TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
IDBP-261686
TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
IDBP-261688
TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
IDBP-717104
IDBP-542234
TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
IDBP-541798
TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
IDBP-535407
TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
IDBP-621081
TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
IDBP-717499
IDBP-717286
IDBP-717516
IDBP-716528
IDBP-717351
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000104907:
Gene Information
Type Protein coding
Genomic Location Chromosome 8:84686307-84699808
Strand Forward strand
Band C2
Transcripts
ENSMUST00000077990
ENSMUST00000001974 ENSMUSP00000001974
ENSMUST00000109768 ENSMUSP00000105390
ENSMUST00000109767 ENSMUSP00000105389
ENSMUST00000125370 ENSMUSP00000135510
ENSMUST00000131700 ENSMUSP00000122526
ENSMUST00000152301 ENSMUSP00000116712
ENSMUST00000127915
ENSMUST00000137953
ENSMUST00000143427 ENSMUSP00000117140
ENSMUST00000128537
ENSMUST00000150085
ENSMUST00000128022
ENSMUST00000148118
ENSMUST00000138300
ENSMUST00000136423 ENSMUSP00000134723
ENSMUST00000175767
ENSMUST00000177364
ENSMUST00000177084 ENSMUSP00000135675
ENSMUST00000175784 ENSMUSP00000135273
ENSMUST00000176914
ENSMUST00000177531 ENSMUSP00000135540
ENSMUST00000177423 ENSMUSP00000135327
ENSMUST00000175870
ENSMUST00000175980
ENSMUST00000175884 ENSMUSP00000135680
ENSMUST00000177260
ENSMUST00000177286
ENSMUST00000176053
ENSMUST00000175704
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 16 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 16 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0004809 tRNA (guanine-N2-)-methyltransferase activity
GO:0016740 transferase activity
GO:0044822 poly(A) RNA binding
GO:0046872 metal ion binding
Biological Process
GO:0008033 tRNA processing
GO:0008150 biological_process
GO:0030488 tRNA methylation
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000104907
View Gene Order
ENSBTAG00000019325
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.275720 Mm.428152
RefSeq NM_001164559 NM_001164560 NM_198020 XM_006530811 XM_006530815
OMIM
CCDS CCDS40410 CCDS52619
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca