Version 5.4
Homo sapiens Gene: TRMT1
Summary
InnateDB Gene IDBG-31765.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TRMT1
Gene Name tRNA methyltransferase 1 homolog (S. cerevisiae)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000104907
Encoded Proteins
IDBP-31767
TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
IDBP-31769
TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
IDBP-373406
TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
IDBP-762533
IDBP-766027
IDBP-760594
IDBP-763134
IDBP-763282
IDBP-765974
IDBP-763226
IDBP-766166
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 19:13104902-13117567
Strand Reverse strand
Band p13.13
Transcripts
ENST00000357720 ENSP00000350352
ENST00000221504 ENSP00000221504
ENST00000437766 ENSP00000416149
ENST00000591425
ENST00000585435
ENST00000588813
ENST00000593157
ENST00000591717 ENSP00000466966
ENST00000592606
ENST00000587633 ENSP00000466716
ENST00000587487 ENSP00000465370
ENST00000588746 ENSP00000468031
ENST00000586830
ENST00000590812
ENST00000585622
ENST00000588229 ENSP00000467984
ENST00000592729
ENST00000592892
ENST00000592814 ENSP00000467938
ENST00000593257
ENST00000592062 ENSP00000466967
ENST00000588511
ENST00000586224 ENSP00000468377
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 29 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 29 [view]
Protein-Protein 29 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0004809 tRNA (guanine-N2-)-methyltransferase activity
GO:0016740 transferase activity
GO:0044822 poly(A) RNA binding
GO:0046872 metal ion binding
Biological Process
GO:0008033 tRNA processing
GO:0030488 tRNA methylation
Cellular Component
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000001909
View Gene Order
ENSBTAG00000019325
Not yet available
Cross-References
SwissProt
TrEMBL K7EMZ2
UniProt Splice Variant
Entrez Gene 55621
UniGene
RefSeq NM_001136035 NM_001142554 NM_017722 XM_005259983 XM_006722794
HUGO HGNC:25980
OMIM 611669
CCDS CCDS12293 CCDS45997
HPRD 08617
IMGT
EMBL AC005546
GenPept
RNA Seq Atlas 55621

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca