Version 5.4
Mus musculus Gene: Rnaseh2a
Summary
InnateDB Gene IDBG-175567.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rnaseh2a
Gene Name ribonuclease H2, large subunit
Synonyms 2400006P09Rik; RNASEHI; RNHIA; RNHL
Species Mus musculus
Ensembl Gene ENSMUSG00000052926
Encoded Proteins
IDBP-175569
ribonuclease H2, large subunit
IDBP-261746
ribonuclease H2, large subunit
IDBP-261748
ribonuclease H2, large subunit
IDBP-536171
ribonuclease H2, large subunit
IDBP-533561
ribonuclease H2, large subunit
IDBP-533424
ribonuclease H2, large subunit
IDBP-534837
ribonuclease H2, large subunit
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000104889:
The protein encoded by this gene is a component of the heterotrimeric type II ribonuclease H enzyme (RNAseH2). RNAseH2 is the major source of ribonuclease H activity in mammalian cells and endonucleolytically cleaves ribonucleotides. It is predicted to remove Okazaki fragment RNA primers during lagging strand DNA synthesis and to excise single ribonucleotides from DNA-DNA duplexes. Mutations in this gene cause Aicardi-Goutieres Syndrome (AGS), a an autosomal recessive neurological disorder characterized by progressive microcephaly and psychomotor retardation, intracranial calcifications, elevated levels of interferon-alpha and white blood cells in the cerebrospinal fluid.[provided by RefSeq, Aug 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 8:84956610-84969767
Strand Reverse strand
Band C3
Transcripts
ENSMUST00000065049 ENSMUSP00000066769
ENSMUST00000109738 ENSMUSP00000105360
ENSMUST00000109736 ENSMUSP00000105358
ENSMUST00000128972 ENSMUSP00000121864
ENSMUST00000147812 ENSMUSP00000120374
ENSMUST00000126029
ENSMUST00000122931
ENSMUST00000140561 ENSMUSP00000118442
ENSMUST00000130902 ENSMUSP00000116164
ENSMUST00000137791
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Predicted by orthology
Total 5 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0004523 RNA-DNA hybrid ribonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0006298 mismatch repair
GO:0006401 RNA catabolic process
GO:0016070 RNA metabolic process
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
Cellular Component
GO:0005634 nucleus
GO:0032299 ribonuclease H2 complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000104889
View Gene Order
ENSBTAG00000009661
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu03030
DNA replication pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa03030
DNA replication pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.182470
RefSeq NM_027187 XM_006544348
OMIM
CCDS CCDS22486
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca