Version 5.4
Mus musculus Gene: Btf3
Summary
InnateDB Gene IDBG-175833.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Btf3
Gene Name basic transcription factor 3
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000021660
Encoded Proteins
IDBP-175835
basic transcription factor 3
IDBP-536025
basic transcription factor 3
IDBP-535955
basic transcription factor 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000145741:
This gene encodes the basic transcription factor 3. This protein forms a stable complex with RNA polymerase IIB and is required for transcriptional initiation. Alternative splicing results in multiple transcript variants encoding different isoforms. This gene has multiple pseudogenes. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 13:98309896-98317006
Strand Reverse strand
Band D1
Transcripts
ENSMUST00000022163 ENSMUSP00000022163
ENSMUST00000152704 ENSMUSP00000118093
ENSMUST00000133461
ENSMUST00000134542 ENSMUSP00000115500
ENSMUST00000133826
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
They are also associated with 17 interaction(s) predicted by orthology.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 17 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0001701 in utero embryonic development
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0015031 protein transport
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000145741
View Gene Order
ENSBTAG00000010012
Not yet available
Cross-References
SwissProt Q64152
TrEMBL Q3UJR8
UniProt Splice Variant
Entrez Gene 218490
UniGene Mm.371688 Mm.390183
RefSeq NM_001170540 NM_145455 XM_006496399 XM_006543613
OMIM
CCDS CCDS49340 CCDS26714
HPRD
IMGT
MGI ID MGI:1202875
MGI Symbol Btf3
EMBL AK139664 AK146332 AK147171 BC008233 BC064010 BC080837 CH466567 S79537 S79538
GenPept AAH08233 AAH64010 AAH80837 BAE24097 BAE27087 BAE27735 EDL00853
RNA Seq Atlas 218490

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca