Version 5.4
Mus musculus Gene: Sec22b
Summary
InnateDB Gene IDBG-177494.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sec22b
Gene Name SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
Synonyms 4930564D15Rik; AA517334; AI480645; C81333; ERS-24; Sec22l1
Species Mus musculus
Ensembl Gene ENSMUSG00000027879
Encoded Proteins
IDBP-177496
SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
IDBP-400831
SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
IDBP-533308
SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 3:97901190-97923276
Strand Forward strand
Band F2.2
Transcripts
ENSMUST00000029476 ENSMUSP00000029476
ENSMUST00000122288 ENSMUSP00000113502
ENSMUST00000130778 ENSMUSP00000117579
ENSMUST00000130620
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000149 SNARE binding
GO:0005484 SNAP receptor activity
GO:0019905 syntaxin binding
Biological Process
GO:0006810 transport
GO:0006888 ER to Golgi vesicle-mediated transport
GO:0015031 protein transport
GO:0016192 vesicle-mediated transport
GO:0048280 vesicle fusion with Golgi apparatus
Cellular Component
GO:0000139 Golgi membrane
GO:0005789 endoplasmic reticulum membrane
GO:0016021 integral component of membrane
GO:0031201 SNARE complex
GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0042470 melanosome
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
KEGG
mmu04130
SNARE interactions in vesicular transport pathway
mmu04145
Phagosome pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.395695 Mm.402040
RefSeq NM_011342
OMIM
CCDS CCDS17658
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca