Version 5.4
Homo sapiens Gene: SNAPC5
Summary
InnateDB Gene IDBG-18064.5
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SNAPC5
Gene Name small nuclear RNA activating complex, polypeptide 5, 19kDa
Synonyms SNAP19
Species Homo sapiens
Ensembl Gene ENSG00000174446
Encoded Proteins
IDBP-18066
small nuclear RNA activating complex, polypeptide 5, 19kDa
IDBP-18068
small nuclear RNA activating complex, polypeptide 5, 19kDa
IDBP-239251
small nuclear RNA activating complex, polypeptide 5, 19kDa
IDBP-746243
IDBP-747860
IDBP-744836
IDBP-746574
IDBP-747333
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 15:66490135-66497813
Strand Reverse strand
Band q22.31
Transcripts
ENST00000316634 ENSP00000319597
ENST00000307979 ENSP00000308439
ENST00000395589 ENSP00000378954
ENST00000563480 ENSP00000457892
ENST00000568875 ENSP00000455680
ENST00000566658 ENSP00000456716
ENST00000565465 ENSP00000455626
ENST00000562411 ENSP00000454421
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003700 sequence-specific DNA binding transcription factor activity
Biological Process
GO:0006355 regulation of transcription, DNA-templated
GO:0006366 transcription from RNA polymerase II promoter
GO:0006383 transcription from RNA polymerase III promoter
GO:0006384 transcription initiation from RNA polymerase III promoter
GO:0010467 gene expression
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000032398
View Gene Order
ENSBTAG00000005210
Not yet available
Pathways
NETPATH
REACTOME
REACT_22339
RNA Polymerase III Abortive And Retractive Initiation pathway
REACT_571
RNA Polymerase III Transcription Initiation From Type 3 Promoter pathway
REACT_281
RNA Polymerase III Transcription Initiation pathway
REACT_1371
RNA Polymerase III Transcription pathway
REACT_21352
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.30174
RefSeq NM_006049
HUGO
OMIM
CCDS CCDS10217
HPRD 16183
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca