Version 5.4
Mus musculus Gene: D10Wsu52e
Summary
InnateDB Gene IDBG-181765.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol D10Wsu52e
Gene Name DNA segment, Chr 10, Wayne State University 52, expressed
Synonyms AI255213; AI463255; D10Wsu52e; FAAP; HSPC117
Species Mus musculus
Ensembl Gene ENSMUSG00000001783
Encoded Proteins
IDBP-181767
DNA segment, Chr 10, Wayne State University 52, expressed
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000100220:
Gene Information
Type Protein coding
Genomic Location Chromosome 10:85938637-85957823
Strand Reverse strand
Band C1
Transcripts
ENSMUST00000001834 ENSMUSP00000001834
ENSMUST00000139413
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 16 experimentally validated interaction(s) in this database.
They are also associated with 20 interaction(s) predicted by orthology.
Experimentally validated
Total 16 [view]
Protein-Protein 15 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 20 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003972 RNA ligase (ATP) activity
GO:0005524 ATP binding
GO:0008452 RNA ligase activity
GO:0017166 vinculin binding
GO:0044822 poly(A) RNA binding
GO:0046872 metal ion binding
Biological Process
GO:0001701 in utero embryonic development
GO:0001890 placenta development
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006396 RNA processing
Cellular Component
GO:0005737 cytoplasm
GO:0072669 tRNA-splicing ligase complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000100220
View Gene Order
ENSBTAG00000011070
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.418370 Mm.9257
RefSeq NM_145422
OMIM
CCDS CCDS24094
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca