Version 5.4
Mus musculus Gene: Snrnp70
Summary
InnateDB Gene IDBG-182806.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Snrnp70
Gene Name small nuclear ribonucleoprotein 70 (U1)
Synonyms 2700022N21Rik; 3200002N22Rik; 70kDa; AI325098; R74807; Rnulp70; Snrp70; Srnp70; U1-70; U1-70K
Species Mus musculus
Ensembl Gene ENSMUSG00000063511
Encoded Proteins
IDBP-182808
small nuclear ribonucleoprotein 70 (U1)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000104852:
Gene Information
Type Protein coding
Genomic Location Chromosome 7:45376462-45395692
Strand Reverse strand
Band B3
Transcripts
ENSMUST00000074575 ENSMUSP00000074160
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 9 experimentally validated interaction(s) in this database.
They are also associated with 91 interaction(s) predicted by orthology.
Experimentally validated
Total 9 [view]
Protein-Protein 9 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 91 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0000398 mRNA splicing, via spliceosome
GO:0043484 regulation of RNA splicing
Cellular Component
GO:0005634 nucleus
GO:0005681 spliceosomal complex
GO:0005685 U1 snRNP
GO:0016607 nuclear speck
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000104852
View Gene Order
ENSBTAG00000001996
Not yet available
Pathways
NETPATH
REACTOME
REACT_249110
mRNA Splicing pathway
REACT_233572
Gene Expression pathway
REACT_260226
mRNA Splicing - Major Pathway pathway
REACT_233950
Processing of Capped Intron-Containing Pre-mRNA pathway
KEGG
mmu03040
Spliceosome pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
NetPath_11
TCR pathway
REACTOME
REACT_467
mRNA Splicing - Major Pathway pathway
REACT_125
Processing of Capped Intron-Containing Pre-mRNA pathway
REACT_1735
mRNA Splicing pathway
REACT_71
Gene Expression pathway
REACT_205948
mRNA Splicing - Major Pathway pathway
REACT_206725
mRNA Splicing pathway
REACT_226022
Gene Expression pathway
REACT_226302
Processing of Capped Intron-Containing Pre-mRNA pathway
KEGG
hsa03040
Spliceosome pathway
INOH
PID NCI
Cross-References
SwissProt Q62376
TrEMBL A2RS68 Q99LY5 Q9CR32
UniProt Splice Variant
Entrez Gene 20637
UniGene
RefSeq NM_009224 XM_006540732 XM_006540734
OMIM
CCDS CCDS21240
HPRD
IMGT
MGI ID MGI:98341
MGI Symbol Snrnp70
EMBL AK011564 AK014311 AK133115 AK146729 BC002169 BC131994 BC132020 CH466603 X15769 X15770 X15771 X15772 X15774 X15775 X15776
GenPept AAH02169 AAI31995 AAI32021 BAB27701 BAB29263 BAE21515 BAE27392 CAA33777 EDL22845 EDL22848
RNA Seq Atlas 20637

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca