Version 5.4
Mus musculus Gene: Pcdh17
Summary
InnateDB Gene IDBG-183216.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Pcdh17
Gene Name protocadherin 17
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000035566
Encoded Proteins
IDBP-183218
protocadherin 17
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene belongs to the protocadherin gene family, a subfamily of the cadherin superfamily. The encoded protein contains six extracellular cadherin domains, a transmembrane domain, and a cytoplasmic tail differing from those of the classical cadherins. The encoded protein may play a role in the establishment and function of specific cell-cell connections in the brain. [provided by RefSeq, Sep 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 14:84443563-84537060
Strand Forward strand
Band D3
Transcripts
ENSMUST00000071370 ENSMUSP00000071325
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
Biological Process
GO:0007156 homophilic cell adhesion
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000118946
View Gene Order
ENSBTAG00000010420
Not yet available
Cross-References
SwissProt
TrEMBL E9PXF0 Q3UTP0
UniProt Splice Variant
Entrez Gene 219228
UniGene Mm.153643 Mm.396657 Mm.406475 Mm.475088
RefSeq NM_001013753 XM_006518907 XM_006518908
OMIM
CCDS CCDS27304
HPRD
IMGT
MGI ID MGI:2684924
MGI Symbol Pcdh17
EMBL AK139275 CT009510
GenPept BAE23940
RNA Seq Atlas 219228

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca