InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Gene: Sparcl1

Summary

InnateDB Gene

IDBG-185288.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Sparcl1

Gene Name

SPARC-like 1

Synonyms

Ecm2; hevin; mast9; Sc1

Species

Mus musculus

Ensembl Gene

ENSMUSG00000029309

Encoded Proteins

IDBP-185290

SPARC-like 1

Protein Structure

Useful resources

Stemformatics EHFPI ImmGen

Entrez Gene

Summary

This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000152583:

Gene Information

Type

Protein coding

Genomic Location

Chromosome 5:104079111-104114088

Strand

Reverse strand

Band

Transcripts

ENSMUST00000031249

ENSMUSP00000031249

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.

Experimentally validated
Total	2 [view]
Protein-Protein	2 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	6 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005509	calcium ion binding
GO:0005515	protein binding

Biological Process

GO:0007165

signal transduction

Cellular Component

GO:0005578	proteinaceous extracellular matrix
GO:0005615	extracellular space
GO:0070062	extracellular vesicular exosome

Orthologs

Species

Homo sapiens

Bos taurus

Gene ID

Gene Order

ENSG00000152583

View Gene Order

ENSBTAG00000004094

Not yet available

Cross-References

SwissProt

P70663

TrEMBL

UniProt Splice Variant

Entrez Gene

13602

UniGene

Mm.29027 Mm.405406

RefSeq

NM_010097 XM_006534767 XM_006534768

OMIM

CCDS

CCDS19483

HPRD

IMGT

MGI ID

MGI:108110

MGI Symbol

Sparcl1

EMBL

AL714024 BC003759 U64827 U66158 U66159 U66160 U66161 U66162 U66163 U66164 U66165 U66166 U77330

GenPept

AAB06444 AAB08451 AAC53172 AAH03759

RNA Seq Atlas

13602