Version 5.4
Mus musculus Gene: Lca5
Summary
InnateDB Gene IDBG-188551.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Lca5
Gene Name Leber congenital amaurosis 5 (human)
Synonyms 4930431B11Rik; 5730406O13Rik; AV274874; ORF64
Species Mus musculus
Ensembl Gene ENSMUSG00000032258
Encoded Proteins
IDBP-188553
Leber congenital amaurosis 5 (human)
IDBP-188555
Leber congenital amaurosis 5 (human)
IDBP-790419
Leber congenital amaurosis 5 (human)
IDBP-790421
Leber congenital amaurosis 5 (human)
IDBP-790422
Leber congenital amaurosis 5 (human)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000135338:
This gene encodes a protein that is thought to be involved in centrosomal or ciliary functions. Mutations in this gene cause Leber congenital amaurosis type V. Alternatively spliced transcript variants are described. [provided by RefSeq, Oct 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 9:83390293-83441127
Strand Reverse strand
Band E2
Transcripts
ENSMUST00000034793 ENSMUSP00000034793
ENSMUST00000034791 ENSMUSP00000034791
ENSMUST00000190514 ENSMUSP00000140753
ENSMUST00000191225
ENSMUST00000190373
ENSMUST00000186802 ENSMUSP00000139529
ENSMUST00000190557
ENSMUST00000188548 ENSMUSP00000140334
ENSMUST00000188907
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0032403 protein complex binding
Biological Process
GO:0042073 intraciliary transport
GO:0045494 photoreceptor cell maintenance
Cellular Component
GO:0005929 cilium
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000135338
View Gene Order
ENSBTAG00000043950
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_027448 NM_029434 XM_006511534 XM_006511535 XM_006511536 XM_006511537 XM_006511538 XM_006511539
OMIM
CCDS CCDS23373 CCDS23374
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca