Version 5.4
Mus musculus Gene: Krr1
Summary
InnateDB Gene IDBG-190237.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Krr1
Gene Name KRR1, small subunit (SSU) processome component, homolog (yeast)
Synonyms 2610511F02Rik; AI255219; AI428520; D10Ertd773e; Hrb2
Species Mus musculus
Ensembl Gene ENSMUSG00000063334
Encoded Proteins
IDBP-533226
KRR1, small subunit (SSU) processome component, homolog (yeast)
IDBP-626390
KRR1, small subunit (SSU) processome component, homolog (yeast)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000111615:
Gene Information
Type Protein coding
Genomic Location Chromosome 10:111972664-111988432
Strand Forward strand
Band D2
Transcripts
ENSMUST00000075924
ENSMUST00000163048 ENSMUSP00000125746
ENSMUST00000162678
ENSMUST00000174653 ENSMUSP00000134408
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 14 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 14 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006364 rRNA processing
GO:0008150 biological_process
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0016020 membrane
GO:0030529 ribonucleoprotein complex
GO:0045171 intercellular bridge
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000111615
View Gene Order
ENSBTAG00000011591
Not yet available
Cross-References
SwissProt Q8BGA5
TrEMBL Q8BVE7
UniProt Splice Variant
Entrez Gene 52705
UniGene Mm.34606 Mm.407271 Mm.487426
RefSeq NM_178610
OMIM
CCDS CCDS24168
HPRD
IMGT
MGI ID MGI:1289274
MGI Symbol Krr1
EMBL AC167231 AK030560 AK032472 AK041854 AK078627 AK146926 AK168675 BC089510 BC094236 CH466539
GenPept AAH89510 AAH94236 BAC27022 BAC27888 BAC31083 BAC37343 BAE27537 BAE40525 EDL21743
RNA Seq Atlas 52705

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca