Version 5.4
Mus musculus Gene: Rnf19b
Summary
InnateDB Gene IDBG-190373.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rnf19b
Gene Name ring finger protein 19B
Synonyms 4930534K13Rik; 4930555L03Rik; Ibrdc3
Species Mus musculus
Ensembl Gene ENSMUSG00000028793
Encoded Proteins
IDBP-190379
ring finger protein 19B
IDBP-190381
ring finger protein 19B
IDBP-536562
ring finger protein 19B
IDBP-531924
ring finger protein 19B
IDBP-625444
ring finger protein 19B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000116514:
IBRDC3 is a cytolysis-associated transmembrane protein expressed in natural killer (NK) cells and T lymphocytes following cytokine stimulation (Kozlowski et al., 1999 [PubMed 10438909]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 4:129058271-129085886
Strand Forward strand
Band D2.2
Transcripts
ENSMUST00000030584 ENSMUSP00000030584
ENSMUST00000097874 ENSMUSP00000095484
ENSMUST00000152565 ENSMUSP00000119611
ENSMUST00000130803 ENSMUSP00000121004
ENSMUST00000147238
ENSMUST00000168461 ENSMUSP00000131373
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 8 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 8 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0016874 ligase activity
Biological Process
GO:0016567 protein ubiquitination
GO:0042267 natural killer cell mediated cytotoxicity
GO:0072643 interferon-gamma secretion
Cellular Component
GO:0005737 cytoplasm
GO:0016021 integral component of membrane
GO:0044194 cytolytic granule
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000116514
View Gene Order
ENSBTAG00000008330
Not yet available
Pathways
NETPATH
REACTOME
REACT_236645
Class I MHC mediated antigen processing & presentation pathway
REACT_230745
Immune System pathway
REACT_199115
Antigen processing: Ubiquitination & Proteasome degradation pathway
REACT_229531
Adaptive Immune System pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_75842
Antigen processing: Ubiquitination & Proteasome degradation pathway
REACT_75774
Adaptive Immune System pathway
REACT_6900
Immune System pathway
REACT_75820
Class I MHC mediated antigen processing & presentation pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.259672 Mm.486170
RefSeq NM_029219 XM_006503458 XM_006537028 XM_006537029
OMIM
CCDS CCDS51305
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca