Version 5.4
Mus musculus Gene: Synpo2
Summary
InnateDB Gene IDBG-192073.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Synpo2
Gene Name synaptopodin 2
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000050315
Encoded Proteins
IDBP-192075
synaptopodin 2
IDBP-268791
synaptopodin 2
IDBP-268793
synaptopodin 2
IDBP-537935
synaptopodin 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000172403:
Gene Information
Type Protein coding
Genomic Location Chromosome 3:123076519-123236149
Strand Reverse strand
Band G1
Transcripts
ENSMUST00000051443 ENSMUSP00000051570
ENSMUST00000106427 ENSMUSP00000102035
ENSMUST00000106426 ENSMUSP00000102034
ENSMUST00000139160 ENSMUSP00000123396
ENSMUST00000184590
ENSMUST00000184403
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 15 interaction(s) predicted by orthology.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 15 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003779 actin binding
GO:0005515 protein binding
GO:0051371 muscle alpha-actinin binding
GO:0071889 14-3-3 protein binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0015629 actin cytoskeleton
GO:0030018 Z disc
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000172403
View Gene Order
ENSBTAG00000006434
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.34359 Mm.474733 Mm.483280
RefSeq NM_080451 XM_006500924 XM_006500925 XM_006500926 XM_006500927
OMIM
CCDS CCDS51063
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca