Version 5.4
| Mus musculus Gene: Col6a6 | |||||||
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| Summary | |||||||
| InnateDB Gene | IDBG-195520.6 | ||||||
| Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||
| Gene Symbol | Col6a6 | ||||||
| Gene Name | collagen, type VI, alpha 6 | ||||||
| Synonyms | |||||||
| Species | Mus musculus | ||||||
| Ensembl Gene | ENSMUSG00000043719 | ||||||
| Encoded Proteins |
collagen, type VI, alpha 6
collagen, type VI, alpha 6
collagen, type VI, alpha 6
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| Protein Structure |
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| Useful resources | Stemformatics EHFPI ImmGen | ||||||
| Entrez Gene | |||||||
| Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000206384:
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| Gene Information | |||||||
| Type | Protein coding | ||||||
| Genomic Location | Chromosome 9:105687809-105828160 | ||||||
| Strand | Reverse strand | ||||||
| Band | F1 | ||||||
| Transcripts |
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| Interactions | |||||||
| Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
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| Gene Ontology | |||||||
Molecular Function |
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| Biological Process |
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| Cellular Component |
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| Orthologs | |||||||
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Species
Homo sapiens
Bos taurus
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Gene ID
Gene Order
Not yet available
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| Pathways | |||||||
| NETPATH | |||||||
| REACTOME |
Extracellular matrix organization pathway
Degradation of the extracellular matrix pathway
Collagen degradation pathway
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| KEGG |
ECM-receptor interaction pathway
Focal adhesion pathway
Protein digestion and absorption pathway
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| INOH | |||||||
| PID NCI | |||||||
| Pathway Predictions based on Human Orthology Data | |||||||
| NETPATH | |||||||
| REACTOME |
Integrin cell surface interactions pathway
Signaling by PDGF pathway
Assembly of collagen fibrils and other multimeric structures pathway
Collagen biosynthesis and modifying enzymes pathway
Collagen degradation pathway
NCAM1 interactions pathway
NCAM signaling for neurite out-growth pathway
Developmental Biology pathway
Extracellular matrix organization pathway
Degradation of the extracellular matrix pathway
Axon guidance pathway
Signal Transduction pathway
ECM proteoglycans pathway
Collagen formation pathway
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| KEGG |
ECM-receptor interaction pathway
Focal adhesion pathway
Protein digestion and absorption pathway
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| INOH | |||||||
| PID NCI | |||||||
| Cross-References | |||||||
| SwissProt | Q8C6K9 | ||||||
| TrEMBL | |||||||
| UniProt Splice Variant | |||||||
| Entrez Gene | 245026 | ||||||
| UniGene | Mm.482507 | ||||||
| RefSeq | NM_172927 NM_001102607 XM_006511732 XM_006511733 | ||||||
| OMIM | |||||||
| CCDS | CCDS23468 CCDS52906 | ||||||
| HPRD | |||||||
| IMGT | |||||||
| MGI ID | MGI:2444259 | ||||||
| MGI Symbol | Col6a6 | ||||||
| EMBL | AK054356 AM748259 AM748260 AM748261 AM748262 | ||||||
| GenPept | BAC35749 CAO01894 CAO01895 CAO01896 CAO01897 | ||||||
| RNA Seq Atlas | 245026 | ||||||